MyMpn Project

DETAILED VIEW FOR Mpnr01

Rna Mpnr01

Stable ID	Mpnr01
Description	16S ribosomal RNA
Location	118312-119825 +
Sequence	ATTTTTCTGAGAGTTTGATCCTGGCTCAGGATTAACGCTGGCGGCATGCCTAATACATGCAAGTCGATCGAAAGTAGTAA TACTTTAGAGGCGAACGGGTGAGTAACACGTATCCAATCTACCTTATAATGGGGGATAACTAGTTGAAAGACTAGCTAAT ACCGCATAAGAACTTTGGTTCGCATGAATCAAAGTTGAAAGGACCTGCAAGGGTTCGTTATTTGATGAGGGTGCGCCATA TCAGCTAGTTGGTGGGGTAACGGCCTACCAAGGCAATGACGTGTAGCTATGCTGAGAAGTAGAATAGCCACAATGGGACT GAGACACGGCCCATACTCCTACGGGAGGCAGCAGTAGGGAATTTTTCACAATGAGCGAAAGCTTGATGGAGCAATGCCGC GTGAACGATGAAGGTCTTTAAGATTGTAAAGTTCTTTTATTTGGGAAGAATGACTTTAGCAGGTAATGGCTAGAGTTTGA CTGTACCATTTTGAATAAGTGACGACTAACTATGTGCCAGCAGTCGCGGTAATACATAGGTCGCAAGCGTTATCCGGATT TATTGGGCGTAAAGCAAGCGCAGGCGGATTGAAAAGTCTGGTGTTAAAGGCAGCTGCTTAACAGTTGTATGCATTGGAAA CTATTAATCTAGAGTGTGGTAGGGAGTTTTGGAATTTCATGTGGAGCGGTGAAATGCGTAGATATATGAAGGAACACCAG TGGCGAAGGCGAAAACTTAGGCCATTACTGACGCTTAGGCTTGAAAGTGTGGGGAGCAAATAGGATTAGATACCCTAGTA GTCCACACCGTAAACGATAGATACTAGCTGTCGGGGCGATCCCCTCGGTAGTGAAGTTAACACATTAAGTATCTCGCCTG GGTAGTACATTCGCAAGAATGAAACTCAAACGGAATTGACGGGGACCCGCACAAGTGGTGGAGCATGTTGCTTAATTCGA CGGTACACGAAAAACCTTACCTAGACTTGACATCCTTGGCAAAGTTATGGAAACATAATGGAGGTTAACCGAGTGACAGG TGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCGTTAGTTAC ATTGTCTAGCGAGACTGCTAATGCAAATTGGAGGAAGGAAGGGATGACGTCAAATCATCATGCCCCTTATGTCTAGGGCT GCAAACGTGCTACAATGGCCAATACAAACAGTCGCCAGCTTGTAAAAGTGAGCAAATCTGTAAAGTTGGTCTCAGTTCGG ATTGAGGGCTGCAATTCGTCCTCATGAAGTCGGAATCACTAGTAATCGCGAATCAGCTATGTCGCGGTGAATACGTTCTC GGGTCTTGTACACACCGCCCGTCAAACTATGAAAGCTGGTAATATTTAAAAACGTGTTGCTAACCATTAGGAAGCGCATG TCAAGGATAGCACCGGTGATTGGAGTTAAGTCGTAACAAGGTACCCCTACGAGAACGTGGGGGTGGATCACCTC
Operon	OP40
Operon location	118248 - 123130

ORFs (EMBOSS)

ORF description			Blast Hit (vs UniRef100)
Sequence	Location (nt)	Translation	QStart	QEnd	QSize	Target	TStart	TEnd	Evalue	Identity
ATTTTTCTGAGAGTTTGATC CTGGCTCAGGATTAACGCTG GCGGCATGCCTAATACATGC AAGTCGATCGAAAGTAGTAA TACTTTAGAGGCGAACGGGT GAGTAACACGTATCCAATCT ACCTTA	118312-118437 +	MFLRVWSWLRINAGGMPNTC KSIESSNTLEANGWVTRIQS TL	no hit
ATACCGCATAAGAACTTTGG TTCGCATGAATCAAAGTTGA AAGGACCTGCAAGGGTTCGT TATTTGATGAGGGTGCGCCA TATCAGC	118470-118556 +	MPHKNFGSHESKLKGPARVR YLMRVRHIS	no hit
ATCAAAGTTGAAAGGACCTG CAAGGGTTCGTTATTTGATG AGGGTGCGCCATATCAGCTA GTTGGTGGGGTAACGGCCTA CCAAGGCAATGACGTG	118499-118594 +	MKVERTCKGSLFDEGAPYQL VGGVTAYQGNDV	no hit
ATAAGAACTTTGGTTCGCAT GAATCAAAGTTGAAAGGACC TGCAAGGGTTCGTTATTTGA TGAGGGTGCGCCATATCAGC TAGTTGGTGGGGTAACGGCC TACCAAGGCAATGACGTGTA GCTATGCTGAGAAGTAGAAT AGCCACAATGGGACTGAGAC ACGGCCCATACTCCTACGGG AGGCAGCAG	118477-118665 +	MRTLVRMNQSWKDLQGFVIW WGCAISASWWGNGLPRQWRV AMLRSRIATMGLRHGPYSYG RQQ	no hit
ATTTTTCACAATGAGCGAAA GCTTGATGGAGCAATGCCGC GTGAACGATGAAGGTCTTTA AGATTG	118672-118737 +	MFHNERKLDGAMPRERWRSL RL	no hit
ATACTCCTACGGGAGGCAGC AGTAGGGAATTTTTCACAAT GAGCGAAAGCTTGATGGAGC AATGCCGCGTGAACGATGAA GGTCTTTAAGATTGTAAAGT TCTTTTATTTGGGAAGAATG ACTTTAGCAGGTAATGGC	118644-118781 +	MLLREAAVGNFSQWAKAWWS NAAWTMKVFKIVKFFYLGRM TLAGNG	no hit
ATAGGTCGCAAGCGTTATCC GGATTTATTGGGCGTAAAGC AAGCGCAGGCGGATTGAAAA GTCTGGTGT	118847-118915 +	MGRKRYPDLLGVKQAQADWK VWC	no hit
GTGACGACTAACTATGTGCC AGCAGTCGCGGTAATACATA GGTCGCAAGCGTTATCCGGA TTTATTGGGCGTAAAGCAAG CGCAGGCGGATTGAAAAGTC TGGTGTTAAAGGCAGCTGCT	118810-118929 +	MTTNYVPAVAVIHRSQALSG FIGRKASAGGLKSLVLKAAA	no hit
TTGTATGCATTGGAAACTAT TAATCTAGAGTGTGGTAGGG AGTTTTGGAATTTCATGTGG AGCGGTGAAATGCGTAGATA TATGAAGGAACACCAGTGGC GAAGGCGAAAACTTAGGCCA TTACTGACGCTTAGGCTTGA AAGTGTGGGGAGCAAA	118936-119091 +	MYALETINLECGREFWNFMW SGEMRRYMKEHQWRRRKLRP LLTLRLESVGSK	no hit
GTGGTAGGGAGTTTTGGAAT TTCATGTGGAGCGGTGAAAT GCGTAGATATATGAAGGAAC ACCAGTGGCGAAGGCGAAAA CTTAGGCCATTACTGACGCT TAGGCTTGAAAGTGTGGGGA GCAAATAGGATTAGATACCC TAGTAGTCCACACCGTAAAC GA	118967-119128 +	MVGSFGISCGAVKCVDIWRN TSGEGENLGHYWRLGLKVWG ANRIRYPSSPHRKR	no hit
ATAGATACTAGCTGTCGGGG CGATCCCCTCGGTAGTGAAG TTAACACATTAAGTATCTCG CCTGGG	119128-119193 +	MDTSCRGDPLGSEVNTLSIS PG	no hit
CTGGGTAGTACATTCGCAAG AATGAAACTCAAACGGAATT GACGGGGACCCGCACAAGTG GTGGAGCATGTTGCT	119189-119263 +	MGSTFARMKLKRNWRGPAQV VEHVA	no hit
ATTCGCAAGAATGAAACTCA AACGGAATTGACGGGGACCC GCACAAGTGGTGGAGCATGT TGCTTAATTCGACGGTACAC GAAAAACCTTACC	119200-119292 +	MRKNETQTELTGTRTSGGAC CLIRRYTKNLT	no hit
ATTAAGTATCTCGCCTGGGT AGTACATTCGCAAGAATGAA ACTCAAACGGAATTGACGGG GACCCGCACAAGTGGTGGAG CATGTTGCTTAATTCGACGG TACACGAAAAACCTTACCTA GACTTGACATCCTTGGCAAA GTTATGGAAACATAATGGAG GT	119175-119336 +	MKYLAWVVHSQEWNSNGIDG DPHKWWSMLLNSTVHEKPYL DLTSLAKLWKHNGG	no hit
ATAATGGAGGTTAACCGAGT GACAGGTGGTGCATGGTTGT CGTCAGCTCGTGTCGTGAGA TGTTGGGTTAAGTCCCGCAA CGAGCGCAACCCTTATCGT	119326-119424 +	MMEVNRVTGGAWLSSARVVR CWVKSRNERNPYR	no hit
TTAACCGAGTGACAGGTGGT GCATGGTTGTCGTCAGCTCG TGTCGTGAGATGTTGGGTTA AGTCCCGCAACGAGCGCAAC CCTTATCGTTAGTTACATTG TC	119336-119437 +	MTEWQVVHGCRQLVSWDVGL SPATSATLIVSYIV	no hit
TTATCGTTAGTTACATTGTC TAGCGAGACTGCTAATGCAA ATTGGAGGAAGGAAGGGATG ACGTCAAATCATCATGCCCC TTATGTC	119418-119504 +	MSLVTLSSETANANWRKEGM TSNHHAPYV	no hit
TTACATTGTCTAGCGAGACT GCTAATGCAAATTGGAGGAA GGAAGGGATGACGTCAAATC ATCATGCCCCTTATGTCTAG GGCTGCAAACGTGCTACAAT GGCCAATACAAACAGTCGCC AGCTTG	119428-119553 +	MHCLARLLMQIGGRKGWRQI IMPLMSRAANVLQWPIQTVA SL	no hit
ATGGCCAATACAAACAGTCG CCAGCTTGTAAAAGTGAGCA AATCTGTAAAGTTGGTCTCA GTTCGGATTGAGGGCTGCAA TTCGTCCTCATGAAGTCGGA ATCAC	119526-119630 +	MANTNSRQLVKVSKSVKLVS VRIEGCNSSSWSRNH	no hit
TTGGAGGAAGGAAGGGATGA CGTCAAATCATCATGCCCCT TATGTCTAGGGCTGCAAACG TGCTACAATGGCCAATACAA ACAGTCGCCAGCTTGTAAAA GTGAGCAAATCTGTAAAGTT GGTCTCAGTTCGGATTGAGG GCTGCAATTCGTCCTCATGA AGTCGGAATCACTAGTAATC GCGAATCAGCTATGTCGCGG TGAATACGTTCTCGGGTCTT GTACACACCGCCCGTCAAAC TATGAAAGCTGG	119459-119710 +	MEEGRDDVKSSCPLCLGLQT CYNGQYKQSPACKSEQICKV GLSSDWGLQFVLMKSESLVI ANQLCRGEYVLGSCTHRPSN YESW	no hit
ATCAGCTATGTCGCGGTGAA TACGTTCTCGGGTCTTGTAC ACACCGCCCGTCAAACTATG AAAGCTGGTAATATT	119643-119717 +	MSYVAVNTFSGLVHTARQTM KAGNI	no hit
TTGAGGGCTGCAATTCGTCC TCATGAAGTCGGAATCACTA GTAATCGCGAATCAGCTATG TCGCGGTGAATACGTTCTCG GGTCTTGTACACACCGCCCG TCAAACTATGAAAGCTGGTA ATATTTAAAAACGTGTTGCT AACCATTAGGAAGCGCATGT CAAGGATAGCACCGGTGATT GGAGTTAAGTCG	119593-119784 +	MRAAIRPHEVGITSNRESAM SRWIRSRVLYTPPVKLWKLV IFKNVLLTIRKRMSRIAPVI GVKS	no hit

IMAGE BROWSERS

OPERON OP40 (Genomic Overview)

Region:118248-123130

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