DETAILED VIEW FOR MPNs005

Rna MPNs005
Stable ID
MPNs005
Description

Location
13390-14200 +
Sequence
AGTAATAATTAATTTAGAAACATCAAGGTCTTTACCATCTGTTTCCTTAATAAGATTTTTGAGATCAGCTTCGAAAGTGG
CGCTACAAGCACTAAGAAATAAAACTGAAGATAATAGTGGGGTTAATAAGAATTTAAATTTCATTAGCGCACGTAGTAAA
TTACTTAATTAAGAAAAGCAAGTATCTAAAGAGATTAACTGTGTATTCAGAATTTGTTCTAGTATCATAGCCTTCCAAAA
AGATTTTCTTAAGATCTCTTTGACTTTGTTTATCTTGCCTTGCAATGATCAACTAAGTGAAACAGGGAACTCAATTCATT
CTGTGTCAACGCCTTCCCCTGTCTTAGTAATGAAACTTATCGTTTTAGATTGGTTCTTTGAAGATGGCTTAATTGCAAGA
GGAAGATCAAAAACATGTTTGTCACCTTTTTTGGCAGCAAACCCATTGGAAGAATAATTTCCATGCCAATTAAAGTTATA
GTTCAACTTAGCATTTATCGAAAAATTATTAAGATCTTGATATTCCATATCGAAATATTCAACTTTTAGTTCGATTTTTA
AAGGATCATTGCCTGTTGCATAAATACCAACATCGGGAAAATTAATTTTCTCAATATCTATTTCACCTTTTTCCGCACTC
TGTTTTCAGGCATCTAACAATAGTTTTGTGGTTTTATCAGGATTAACTTCGTAAGATTTCTTTAGAGAAGTTATTAAGTT
TTTTCTGCCTTCAGAAGTTTTGATTACTTTGTACACATCAACGTCTTGTTTAGTGGTTTCTTGAATAAGATTTCTTAGAT
CAGACTGGATA
Operon
OP4
Operon location
13390 - 14200
ORFs (EMBOSS)
ORF description Blast Hit (vs UniRef100)
Sequence Location (nt) Translation QStart QEnd QSize Target TStart TEnd Evalue Identity
ATCAAGGTCTTTACCATCTG
TTTCCTTAATAAGATTTTTG
AGATCAGCTTCGAAAGTGGC
GCTACAAGCACTAAGAAA
13411-13488 +
MKVFTICFLNKIFEISFESG
ATSTKK
no hit
ATAATTAATTTAGAAACATC
AAGGTCTTTACCATCTGTTT
CCTTAATAAGATTTTTGAGA
TCAGCTTCGAAAGTGGCGCT
ACAAGCACTAAGAAATAAAA
CTGAAGATAATAGTGGGGTT
AATAAGAATTTAAATTTCAT
TAGCGCACGTAGTAAATTAC
TTAAT
13394-13558 +
MINLETSRSLPSVSLIRFLR
SASKVALQALRNKTEDNSGV
NKNLNFISARSKLLN
no hit
ATTTCATTAGCGCACGTAGT
AAATTACTTAATTAAGAAAA
GCAAGTATCTAAAGAGATTA
ACTGTGTATTCAGAATTTGT
TCTAGTATCA
13527-13616 +
MSLAHVVNYLIKKSKYLKRL
TVYSEFVLVS
no hit
ATTAACTGTGTATTCAGAAT
TTGTTCTAGTATCATAGCCT
TCCAAAAAGATTTTCTTAAG
ATCTCTTTGACTTTGTTTAT
CTTGCCTTGCAATGATCAAC
TAAGTGAAACAGGGAACTCA
ATTCATTCTGTGTCAACGCC
TTCCCCTGTCTTAGTAATGA
AACTTATCGTTTTAGATTGG
TTCTTTGAAGATGGCTTAAT
TGCAAGAGGAAGATCAAAAA
CATGTTTGTCACCTTTTTTG
GCAGCAAACCCATTGGAAGA
A
13583-13843 +
MNCVFRICSSIIAFQKDFLK
ISLTLFILPCNDQLSETGNS
IHSVSTPSPVLVMKLIVLDW
FFEDGLIARGRSKTCLSPFL
AANPLEE
no hit
TTGCAAGAGGAAGATCAAAA
ACATGTTTGTCACCTTTTTT
GGCAGCAAACCCATTGGAAG
AATAATTTCCATGCCAAT
13782-13859 +
MQEEDQKHVCHLFWQQTHWK
NNFHAN
no hit
TTGCAATGATCAACTAAGTG
AAACAGGGAACTCAATTCAT
TCTGTGTCAACGCCTTCCCC
TGTCTTAGTAATGAAACTTA
TCGTTTTAGATTGGTTCTTT
GAAGATGGCTTAATTGCAAG
AGGAAGATCAAAAACATGTT
TGTCACCTTTTTTGGCAGCA
AACCCATTGGAAGAATAATT
TCCATGCCAATTAAAGTTAT
AGTTCAACTTAGCATTTATC
GAAAAATTATTAAGATCTTG
ATATTCCATATCGAAATATT
CAACTTT
13669-13935 +
MQWSTKWNRELNSFCVNAFP
CLSNETYRFRLVLWRWLNCK
RKIKNMFVTFFGSKPIGRII
SMPIKVIVQLSIYRKIIKIL
IFHIEIFNF
no hit
TTAGCATTTATCGAAAAATT
ATTAAGATCTTGATATTCCA
TATCGAAATATTCAACTTTT
AGTTCGATTTTTAAAGGATC
ATTGCCTGTTGCA
13877-13969 +
MAFIEKLLRSWYSISKYSTF
SSIFKGSLPVA
no hit
ATTCCATATCGAAATATTCA
ACTTTTAGTTCGATTTTTAA
AGGATCATTGCCTGTTGCAT
AAATACCAACATCGGGAAAA
T
13911-13991 +
MPYRNIQLLVRFLKDHCLLH
KYQHREN
no hit
ATCATTGCCTGTTGCATAAA
TACCAACATCGGGAAAATTA
ATTTTCTCAATATCTATTTC
ACCTTTTTCCGCACTCTGTT
TTCAGGCATC
13954-14043 +
MIACCINTNIGKINFLNIYF
TFFRTLFSGI
no hit
ATACCAACATCGGGAAAATT
AATTTTCTCAATATCTATTT
CACCTTTTTCCGCACTCTGT
TTTCAGGCATCTAACAATAG
TTTTGTGGTTTTATCAGGAT
TAACTTCG
13973-14080 +
MPTSGKLIFSISISPFSALC
FQASNNSFVVLSGLTS
no hit
ATTTCTTTAGAGAAGTTATT
AAGTTTTTTCTGCCTTCAGA
AGTTTTGATTACTTTGTACA
CATCAACGTCTTGTT
14085-14159 +
MSLEKLLSFFCLQKFWLLCT
HQRLV
no hit
ATTAAGTTTTTTCTGCCTTC
AGAAGTTTTGATTACTTTGT
ACACATCAACGTCTTGTTTA
GTGGTTTCTTGAATAAGATT
TCTTAGATCAGACTGGATA
14102-14200 +
MKFFLPSEVLITLYTSTSCL
VVSWIRFLRSDWI
no hit
IMAGE BROWSERS

OPERON OP4 (Genomic Overview)
Region:13390-14200

Click on the features to jump to a different MyMpn page

 ExportIMG MyGBrowser